Simulation data from Nishimura et al. (2023), "Unique Amphipathic a-helix Drives Membrane Insertion and Enzymatic Activity of ATG3". The dataset contains the MD simulations executed for the Atg3/LC3/lipid membrane system, both in the WT and 5W-mutated variants. More information can be found in the README file and in Table 1 of the cited paper
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
Supplementary data from molecular dynamics simulations performed on different states of bMRP1 (IF ap...
AbstractLipid modification of cytoplasmic proteins initiates membrane engagement that triggers diver...
Here, we provide atomistic molecular dynamics (CHARMM36m force field and GROMACS software) simulatio...
The interaction of α-helical peptides with lipid bilayers is central to our understanding of the phy...
Integral membrane proteins containing at least one transmembrane (TM) alpha-helix are believed to ac...
System description ------------------- - Title: (TM3_D2A-CIS) Simulation POPC_512_TM3_D2A_10_5up_5do...
GROMACS configuration, topologies files (.itp, .tpr, .top, .mdp) for reproducing atomistic molecular...
Pleckstrin homology (PH) domains can recruit proteins to membranes by recognition of phosphatidylino...
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
System description ------------------- - Title: (TM3-CIS) Simulation POPC_512_TM3_10_5up_5down_NaCl_...
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
Autophagosome biogenesis requires a localized perturbation of lipid membrane dynamics and a unique p...
AbstractThe interaction of α-helical peptides with lipid bilayers is central to our understanding of...
γ-secretase, an intramembrane-cleaving aspartyl protease is involved in the cleavage of a large numb...
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
Supplementary data from molecular dynamics simulations performed on different states of bMRP1 (IF ap...
AbstractLipid modification of cytoplasmic proteins initiates membrane engagement that triggers diver...
Here, we provide atomistic molecular dynamics (CHARMM36m force field and GROMACS software) simulatio...
The interaction of α-helical peptides with lipid bilayers is central to our understanding of the phy...
Integral membrane proteins containing at least one transmembrane (TM) alpha-helix are believed to ac...
System description ------------------- - Title: (TM3_D2A-CIS) Simulation POPC_512_TM3_D2A_10_5up_5do...
GROMACS configuration, topologies files (.itp, .tpr, .top, .mdp) for reproducing atomistic molecular...
Pleckstrin homology (PH) domains can recruit proteins to membranes by recognition of phosphatidylino...
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
System description ------------------- - Title: (TM3-CIS) Simulation POPC_512_TM3_10_5up_5down_NaCl_...
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
Autophagosome biogenesis requires a localized perturbation of lipid membrane dynamics and a unique p...
AbstractThe interaction of α-helical peptides with lipid bilayers is central to our understanding of...
γ-secretase, an intramembrane-cleaving aspartyl protease is involved in the cleavage of a large numb...
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino...
Supplementary data from molecular dynamics simulations performed on different states of bMRP1 (IF ap...
AbstractLipid modification of cytoplasmic proteins initiates membrane engagement that triggers diver...